BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B12LP1|AL430501
(951 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig193 1401 0.0
>3x_Contig193
Length = 799
Score = 1401 bits (706), Expect = 0.0
Identities = 757/774 (97%), Gaps = 1/774 (0%)
Strand = Plus / Minus
Query: 173 actatcatctttacgaatttcc-aaagaacgatcttgctcttctcctttggtggatggaa 231
|||||| ||||||| ||||||| ||| ||| ||||||||||||||||||||||||| ||
Sbjct: 789 actatcttctttactaatttcccaaataactatcttgctcttctcctttggtggatttaa 730
Query: 232 ttgacgatatttctctaggtgaaggagatttcccttcagaatcttcctccccctcttcat 291
|| || ||||||||||| |||| | ||||||||||||||||||||||||| |||||||
Sbjct: 729 tttactatatttctctatttgaattatatttcccttcagaatcttcctccccttcttcat 670
Query: 292 cgctgttgtttgaaacttcgtatccatattttgccctcaccgctgctttgagtaaattca 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cgctgttgtttgaaacttcgtatccatattttgccctcaccgctgctttgagtaaattca 610
Query: 352 cttcatcaggatccgttagaccaagagagctgtggttagcataatgcaaggcagttttct 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cttcatcaggatccgttagaccaagagagctgtggttagcataatgcaaggcagttttct 550
Query: 412 ttcgtttgtcagttttctgtggatccgccccggcttcgagtaaaagtttcacgacgttga 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttcgtttgtcagttttctgtggatccgccccggcttcgagtaaaagtttcacgacgttga 490
Query: 472 catgtccacgcccgacagatagcatcaacggagtttgaccttctttgttactcatattaa 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 catgtccacgcccgacagatagcatcaacggagtttgaccttctttgttactcatattaa 430
Query: 532 cttgtgcgccaaaggctaaaaataaacttactacgtcatcatgaccatatatgcaactct 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cttgtgcgccaaaggctaaaaataaacttactacgtcatcatgaccatatatgcaactct 370
Query: 592 caaggaaacatctgaaatcaggtctaccaccgttttcaaggtacgaaccgacgtatgcta 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 caaggaaacatctgaaatcaggtctaccaccgttttcaaggtacgaaccgacgtatgcta 310
Query: 652 atttcccctctttggaagctttcaaaagcttgtttttacccaattttgaactgatatcag 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atttcccctctttggaagctttcaaaagcttgtttttacccaattttgaactgatatcag 250
Query: 712 tscaataaaagtcgtcatcatggttgagttgtttgtctatatcatctgaatgtcttgaca 771
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tccaataaaagtcgtcatcatggttgagttgtttgtctatatcatctgaatgtcttgaca 190
Query: 772 tggaactagactgtraggtgcgatgggaatgttttatatatttcctcgttgctctcttta 831
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tggaactagactgtaaggtgcgatgggaatgttttatatatttcctcgttgctctcttta 130
Query: 832 acatatctttcatatcgtgcactattcttctatcatcattatccatgtctgattcctcct 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 acatatctttcatatcgtgcactattcttctatcatcattatccatgtctgattcctcct 70
Query: 892 caatagattcaattgcacttagacctttggcatttaccattgttggatctgctc 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 caatagattcaattgcacttagacctttggcatttaccattgttggatctgctc 16
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7476
Number of Sequences: 1807
Number of extensions: 7476
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)